CDS
| Accession Number | TCMCG057C24227 |
| gbkey | CDS |
| Protein Id | XP_018492967.1 |
| Location | join(10164329..10164402,10164498..10164646,10164732..10164954,10165044..10165269,10165334..10165485,10165570..10165877,10165956..10166125,10166245..10166481) |
| Gene | LOC108863141 |
| GeneID | 108863141 |
| Organism | Raphanus sativus |
Protein
| Length | 512aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA344915 |
| db_source | XM_018637465.1 |
| Definition | PREDICTED: probable RNA-dependent RNA polymerase 5 [Raphanus sativus] |
EGGNOG-MAPPER Annotation
| COG_category | H |
| Description | Probably involved in the RNA silencing pathway and required for the generation of small interfering RNAs (siRNAs) |
| KEGG_TC | - |
| KEGG_Module | - |
| KEGG_Reaction | - |
| KEGG_rclass | - |
| BRITE |
ko00000
[VIEW IN KEGG] ko01000 [VIEW IN KEGG] ko03036 [VIEW IN KEGG] |
| KEGG_ko |
ko:K11699
[VIEW IN KEGG] |
| EC |
2.7.7.48
[VIEW IN KEGG]
[VIEW IN INGREDIENT] |
| KEGG_Pathway | - |
| GOs | - |
Sequence
| CDS: ATGGTCAAGGTGTCCAAAGATCAAGCCTTGTCTGATTTTAGCACCTTTAACTCCCTGGAGGTTGTCACTACAAGTAACCCACCAAGAAGAACTAAGCTATCGAGGAACTTGGTCGCGCTTCTGAGCTATGGTGGAGTTCCTGATGACTTCTTTTTGGATATAGTGCGCAACACGTTGGAAGAGTCGAGAACAATATTCGAAAACAAACGTGCTGCTGTGAATGCTGCTCGTAATTATGGGGATATGGACGACTATAAAGCTTATGAAATGATCATGTCGCGTATCCCACTTGACGAACCACACTTGAAGGATCATCTGTCTATTCTTCTAAAGACAGAAAAGAATGATCTGAAAGCAGGAAAGCTTCTTGTTACCGAGTCATACTATCTCATGGGCACGGTTGATCCCACCGGAAAGCTCAAGCAAAACGAAGTCTGCGTCATCCTGGAGACTGGGCAAATATCAGGGAAAGTGCTAGTTTACAGGAACCCTGGGCTACATTTTGGAGACATACATGTACTTAAGGCTACATATGTTCAAGCCTTGGAAGAGTATGTAGGAAACTCCAAGTATGGTGTGTTCTTCCCTCAGAAAGGTCCAAGATCTTTGGGTGATGAGATTGCAGGTGGTGACTTTGATGGTGATATGTATTTCATATCCAGAAATCCCAAGCTACTGGAACACTTCAAGCCCTGTGTAGTACCATGGGTTAGCTCTTCTCCTCCTAGTAGAATTTATACTGGTCCAGCGCCAAGTGAACTTACACCAGAAATGCTGGAAGAAAAGCTTTTCAGTATGTTTTTGGAGGCAAGATTTAATTCCAGCAACGTTGTAGGGGCAGCTGCTGATAGCTGGCTAAGCATAATGGACCGTTTCCTCACGTTAGGAGATGAGAGAGCTAAGGAAAAAGCTGGGAGGAAGAAACAAATTCTGAAGGCTATTGATGTATACTATGATGCTCTTGATGCACCAAAAAACGGTGCCAGGGTCGAACTCCCATTAGACTTAAGACTCGTGGATTTTCCACATTACATGGAGAATAAGCATAAGAAAAGTTTCAACTCCACTTCTATTCTTGGATTGATCTATGACACCGTAGTATCTCAGAATGAAGAGGAACCCCCTCCATGTGAAATCAAGAAACTCCCGTGCTTTGAAGATGAGATGGTCCTTGATTCTTACATGGAGAAATATAGACGCTGGTACCAGGGATATAAAAGTGAAATGAACCAGGCGATGGGAACCGATGAAAATAATAATAAGAAGGAATCAGCCAGTGAAGTCATCCAGAAATACAAGCAGGACTTCTATGGTGCTGCAGGGTTTGAAGACAGCAATAAAAGCTTTGAAGAGCTCTATCAACAAGCCTTGGCACTTTACAACATCGTTTACGATTATGCCATCATAAAGAACAAAGTTCGTTACTGCGGGTTTGTCTGGAAGGTTGCAGGACCAGTCCTGTGCAAATTCTACCTTAAGAAAAAGAAGGAGAAGTCAGTCTTCTCTGCTGTTTCAATGCACAAAGAGCTCTATGGTTGA |
| Protein: MVKVSKDQALSDFSTFNSLEVVTTSNPPRRTKLSRNLVALLSYGGVPDDFFLDIVRNTLEESRTIFENKRAAVNAARNYGDMDDYKAYEMIMSRIPLDEPHLKDHLSILLKTEKNDLKAGKLLVTESYYLMGTVDPTGKLKQNEVCVILETGQISGKVLVYRNPGLHFGDIHVLKATYVQALEEYVGNSKYGVFFPQKGPRSLGDEIAGGDFDGDMYFISRNPKLLEHFKPCVVPWVSSSPPSRIYTGPAPSELTPEMLEEKLFSMFLEARFNSSNVVGAAADSWLSIMDRFLTLGDERAKEKAGRKKQILKAIDVYYDALDAPKNGARVELPLDLRLVDFPHYMENKHKKSFNSTSILGLIYDTVVSQNEEEPPPCEIKKLPCFEDEMVLDSYMEKYRRWYQGYKSEMNQAMGTDENNNKKESASEVIQKYKQDFYGAAGFEDSNKSFEELYQQALALYNIVYDYAIIKNKVRYCGFVWKVAGPVLCKFYLKKKKEKSVFSAVSMHKELYG |